Package index • VGAM

All functions

A1A2A3(): The A1A2A3 Blood Group System
AA.Aa.aa(): The AA-Aa-aa Blood Group System
AB.Ab.aB.ab(): The AB-Ab-aB-ab Blood Group System
ABO(): The ABO Blood Group System
AICvlm() AICvgam() AICrrvglm() AICdrrvglm() AICqrrvglm() AICrrvgam(): Akaike's Information Criterion
AR1(): Autoregressive Process with Order-1 Family Function
AR1EIM(): Computation of the Exact EIM of an Order-1 Autoregressive Process
dAR1(): The AR-1 Autoregressive Process
BICvlm(): Bayesian Information Criterion
CM.equid() CM.free() CM.ones() CM.symm0() CM.symm1() CM.qnorm() CM.qlogis(): Constraint Matrices for Symmetry, Order, Parallelism, etc.
Coef(): Computes Model Coefficients and Quantities
Coef.qrrvglm-class: Class “Coef.qrrvglm”
Coef.qrrvglm(): Returns Important Matrices etc. of a QO Object
Coef.rrvglm-class: Class “Coef.rrvglm”
Coef.rrvglm(): Returns Important Matrices etc. of a RR-VGLM Object
Coef.vlm(): Extract Model Coefficients for VLM Objects
TypicalVGAMfamilyFunction(): Common VGAM Family Function Arguments
Huggins89table1 Huggins89.t1: Table 1 of Huggins (1989)
Influence() Influence.vglm(): Influence Function (S4 generic) of a Fitted Model
dinv.gaussian() pinv.gaussian() rinv.gaussian(): The Inverse Gaussian Distribution
KLD() KLDvglm(): Kullback-Leibler Divergence
TypicalVGAMlink(): Link functions for VGLM/VGAM/etc. families
MNSs(): The MNSs Blood Group System
Max(): Maximums
dN1binom() rN1binom(): Linear Model and Binomial Mixed Data Type Distribution
N1binomial(): Linear Model and Binomial Mixed Data Type Family Function
dN1pois() rN1pois(): Linear Model and Poisson Mixed Data Type Distribution
N1poisson(): Linear Model and Poisson Mixed Data Type Family Function
Opt(): Optimums
dpareto() ppareto() qpareto() rpareto(): The Pareto Distribution
Qvar(): Quasi-variances Preprocessing Function
R2latvar(): R-squared for Latent Variable Models
Rank() Rank.rrvglm() Rank.qrrvglm() Rank.rrvgam(): Rank
Rcim(): Mark the Baseline of Row and Column on a Matrix data
SURff(): Seemingly Unrelated Regressions Family Function
Select(): Select Variables for a Formula Response or the RHS of a Formula
SurvS4-class show,SurvS4-method: Class "SurvS4"
SurvS4() is.SurvS4(): Create a Survival Object
TIC() TICvlm(): Takeuchi's Information Criterion
Tol(): Tolerances
Trunc(): Truncated Values for the GT-Expansion Method
param.names() dimm() interleave.VGAM(): Utility Functions for the VGAM Package
V1: V1 Flying-Bombs Hits in London
V2: V2 Missile Hits in London
VGAM-package VGAM: Vector Generalized Linear and Additive Models and Other Associated Models
acat(): Ordinal Regression with Adjacent Categories Probabilities
alogitlink() lcalogitlink(): Arcsine–Logit Link Mixtures
altered() inflated() truncated() is.altered() is.deflated() is.inflated() is.truncated(): Altered, Inflated, Truncated and Deflated Values in GAITD Regression
amlbinomial(): Binomial Logistic Regression by Asymmetric Maximum Likelihood Estimation
amlexponential(): Exponential Regression by Asymmetric Maximum Likelihood Estimation
amlnormal(): Asymmetric Least Squares Quantile Regression
amlpoisson(): Poisson Regression by Asymmetric Maximum Likelihood Estimation
anova(<vglm>): Analysis of Deviance for Vector Generalized Linear Model Fits
asinlink(): Arcsine Link Function
auuc: Auckland University Undergraduate Counts Data
aux.posbernoulli.t(): Auxiliary Function for the Positive Bernoulli Family Function with Time Effects
backPain: Data on Back Pain Prognosis, from Anderson (1984)
beggs: Bacon and Eggs Data
bell(): The Bell Series of Integers
dbenf() pbenf() qbenf() rbenf(): Benford's Distribution
benini1(): Benini Distribution Family Function
dbenini() pbenini() qbenini() rbenini(): The Benini Distribution
betaII(): Beta Distribution of the Second Kind
betaR(): The Two-parameter Beta Distribution Family Function
dbetabinom() pbetabinom() rbetabinom() dbetabinom.ab() pbetabinom.ab() rbetabinom.ab() dzoibetabinom() pzoibetabinom() rzoibetabinom() dzoibetabinom.ab() pzoibetabinom.ab() rzoibetabinom.ab(): The Beta-Binomial Distribution
betabinomial(): Beta-binomial Distribution Family Function
betabinomial.rho(): Beta-binomial Distribution Family Function (with known rho)
betabinomialff(): Beta-binomial Distribution Family Function
betaff(): The Two-parameter Beta Distribution Family Function
dbetageom() pbetageom() rbetageom(): The Beta-Geometric Distribution
betageometric(): Beta-geometric Distribution Family Function
dbetanorm() pbetanorm() qbetanorm() rbetanorm(): The Beta-Normal Distribution
betaprime(): The Beta-Prime Distribution
biamhcop(): Ali-Mikhail-Haq Distribution Family Function
dbiamhcop() pbiamhcop() rbiamhcop(): Ali-Mikhail-Haq Bivariate Distribution
biclaytoncop(): Clayton Copula (Bivariate) Family Function
dbiclaytoncop() rbiclaytoncop(): Clayton Copula (Bivariate) Distribution
bifgmcop(): Farlie-Gumbel-Morgenstern's Bivariate Distribution Family Function
dbifgmcop() pbifgmcop() rbifgmcop(): Farlie-Gumbel-Morgenstern's Bivariate Distribution
bifgmexp(): Bivariate Farlie-Gumbel-Morgenstern Exponential Distribution Family Function
bifrankcop(): Frank's Bivariate Distribution Family Function
dbifrankcop() pbifrankcop() rbifrankcop(): Frank's Bivariate Distribution
bigumbelIexp(): Gumbel's Type I Bivariate Distribution Family Function
dbilogis() pbilogis() rbilogis(): Bivariate Logistic Distribution
bilogistic(): Bivariate Logistic Distribution Family Function
binom2.or(): Bivariate Binary Regression with an Odds Ratio (Family Function)
rbinom2.or() dbinom2.or(): Bivariate Odds Ratio Model
binom2.rho() binom2.Rho(): Bivariate Probit Regression
rbinom2.rho() dbinom2.rho(): Bivariate Probit Model
binom3.or(): Trivariate Binary Regression with Three Odds Ratios (Family Function)
dbinom3.or() rbinom3.or(): Trivariate Odds Ratio Model
binomialff(): Binomial Family Function
binormal(): Bivariate Normal Distribution Family Function
dbinorm() pbinorm() rbinorm() pnorm2(): Bivariate Normal Distribution
binormalcop(): Gaussian Copula (Bivariate) Family Function
dbinormcop() pbinormcop() rbinormcop(): Gaussian Copula (Bivariate) Distribution
biplackettcop(): Plackett's Bivariate Copula Family Function
dbiplackcop() pbiplackcop() rbiplackcop(): Plackett's Bivariate Copula
biplot,rrvglm-method biplot,qrrvglm-method: Biplot of Constrained Regression Models
bisa(): Birnbaum-Saunders Regression Family Function
dbisa() pbisa() qbisa() rbisa(): The Birnbaum-Saunders Distribution
bistudentt(): Bivariate Student-t Family Function
dbistudentt(): Bivariate Student-t Distribution Density Function
bmi.nz: Body Mass Index of New Zealand Adults Data
borel.tanner(): Borel-Tanner Distribution Family Function
dbort() rbort(): The Borel-Tanner Distribution
brat(): Bradley Terry Model
Brat(): Inputting Data to fit a Bradley Terry Model
bratt(): Bradley Terry Model With Ties
budworm: Western Spuce Budworm
calibrate,rrvglm-method calibrate,qrrvglm-method calibrate,rrvgam-method calibrate,Coef.qrrvglm-method: Calibration for Constrained Regression Models
calibrate(): Model Calibrations
calibrate.qrrvglm(): Calibration for CQO and CAO models
calibrate.qrrvglm.control(): Control Function for CQO/CAO Calibration
calibrate.rrvglm(): Calibration for CLO models (RR-VGLMs)
calibrate.rrvglm.control(): Control Function for CLO (RR-VGLM) Calibration
cao(): Fitting Constrained Additive Ordination (CAO)
cao.control(): Control Function for RR-VGAMs (CAO)
dcard() pcard() qcard() rcard() dcard2() pcard2() qcard2() rcard2(): Cardioid Distribution
cardioid() cardioid2(): Cardioid Distribution Family Function
cauchitlink(): Cauchit Link Function
cauchy() cauchy1(): Cauchy Distribution Family Function
cdf.lmscreg(): Cumulative Distribution Function for LMS Quantile Regression
cens.gumbel(): Censored Gumbel Distribution
cens.normal(): Censored Normal Distribution
cens.poisson(): Censored Poisson Family Function
cfibrosis: Cystic Fibrosis Data
cgo(): Redirects the user to cqo
chest.nz: Chest Pain in NZ Adults Data
chinese.nz: Chinese Population in New Zealand 1867–2001 Data
chisq(): Chi-squared and Chi Distributions
clo(): Redirects the User to rrvglm()
clogloglink() cloglink(): Complementary Log-log Link Function
coalminers: Breathlessness and Wheeze Amongst Coalminers Data
coefvgam(): Extract Model Coefficients of a vgam() Object
coefvlm(): Extract Model Coefficients
concoef-method concoef,cao-method concoef,Coef.cao-method concoef,rrvglm-method concoef,qrrvglm-method concoef,Coef.rrvglm-method concoef,Coef.qrrvglm-method: Constrained (Canonical) Coefficients
concoef(): Extract Model Constrained/Canonical Coefficients
confintvglm(): Confidence Intervals for Parameters of VGLMs
constraints() constraints.vlm(): Constraint Matrices
cops() copsvglm(): Centre of the Parameter Space
cops3(): Centre of the Parameter Space for GLMs
copsd() copsdvglm(): Centre of the Parameter Space Distance
copsd3(): Centre of the Parameter Space Distance for GLMs
corbet: Corbet's Butterfly Data
cqo(): Fitting Constrained Quadratic Ordination (CQO)
crashi crashf crashtr crashmc crashbc crashp alcoff alclevels: Crashes on New Zealand Roads in 2009
cratio(): Ordinal Regression with Continuation Ratios
cumulative(): Ordinal Regression with Cumulative Probabilities
dagum(): Dagum Distribution Family Function
ddagum() pdagum() qdagum() rdagum(): The Dagum Distribution
deermice: Captures of Peromyscus maniculatus (Also Known as Deer Mice).
deplot.lmscreg(): Density Plot for LMS Quantile Regression
depvar(): Dependent (Response) Variable Extracted
df.residual_vlm(): Residual Degrees-of-Freedom
dgaitdplot(): Plotting the GAITD Combo Density
diffzeta(): Differenced Zeta Distribution Family Function
ddiffzeta() pdiffzeta() qdiffzeta() rdiffzeta(): Differenced Zeta Distribution
dirichlet(): Fitting a Dirichlet Distribution
dirmul.old(): Fitting a Dirichlet-Multinomial Distribution
dirmultinomial(): Fitting a Dirichlet-Multinomial Distribution
double.cens.normal(): Univariate Normal Distribution with Double Censoring
double.expbinomial(): Double Exponential Binomial Distribution Family Function
add1(<vglm>) drop1(<vglm>): Add or Drop All Possible Single Terms to/from a Model
ducklings: Relative Frequencies of Serum Proteins in White Pekin Ducklings
eCDF.vglm(): Empirical Cumulative Distribution Function
deexp() peexp() qeexp() reexp(): Expectiles of the Exponential Distribution
denorm() penorm() qenorm() renorm(): Expectiles of the Normal Distribution
enzyme: Enzyme Data
erf() erfc(): Error Function, and variants
erlang(): Erlang Distribution
deunif() peunif() qeunif() reunif(): Expectiles of the Uniform Distribution
expexpff(): Exponentiated Exponential Distribution
expexpff1(): Exponentiated Exponential Distribution
expgeometric(): Exponential Geometric Distribution Family Function
dexpgeom() pexpgeom() qexpgeom() rexpgeom(): The Exponential Geometric Distribution
expint() expexpint() expint.E1(): The Exponential Integral and Variants
explink(): Exponential Link Function
dexplog() pexplog() qexplog() rexplog(): The Exponential Logarithmic Distribution
explogff(): Exponential Logarithmic Distribution Family Function
exponential(): Exponential Distribution
exppoisson(): Exponential Poisson Distribution Family Function
dexppois() pexppois() qexppois() rexppois(): The Exponential Poisson Distribution
dextbetabinom() pextbetabinom() qextbetabinom() rextbetabinom(): The Extended Beta-Binomial Distribution
extbetabinomial(): Extended Beta-binomial Distribution Family Function
dextlogF(): Extended log-F Distribution
extlogF1(): Extended log-F Distribution Family Function
eyed: Eye Disease Data: Diabetic Retinopathy
familyname() familyname.vlm(): Family Function Name
fbeetle: Mortality of Flour Beetles from Carbon Disulphide
felix(): Felix Distribution Family Function
dfelix(): The Felix Distribution
fff(): F Distribution Family Function
fill1(): Creates a Matrix of Appropriate Dimension
finney44: Toxicity trial for insects
fisherzlink(): Fisher's Z Link Function
fisk(): Fisk Distribution family function
dfisk() pfisk() qfisk() rfisk(): The Fisk Distribution
fittedvlm(): Fitted Values of a VLM object
fix.crossing.vglm(): Fixing a Quantile Regression having Crossing
dfoldnorm() pfoldnorm() qfoldnorm() rfoldnorm(): The Folded-Normal Distribution
foldnormal(): Folded Normal Distribution Family Function
foldsqrtlink() sqrtlink(): Square Root and Folded Square Root Link Functions
formula(<vlm>) formulavlm() term.names() term.namesvlm(): Model Formulae and Term Names for VGLMs
frechet(): Frechet Distribution Family Function
dfrechet() pfrechet() qfrechet() rfrechet(): The Frechet Distribution
freund61(): Freund's (1961) Bivariate Extension of the Exponential Distribution
dgaitdbinom() pgaitdbinom() qgaitdbinom() rgaitdbinom(): Generally Altered, Inflated, Truncated and Deflated Binomial Distribution
gaitdlog(): Generally Altered, Inflated, Truncated and Deflated Logarithmic Regression
dgaitdlog() pgaitdlog() qgaitdlog() rgaitdlog(): Generally Altered, Inflated, Truncated and Deflated Logarithmic Distribution
dgaitdnbinom() pgaitdnbinom() qgaitdnbinom() rgaitdnbinom(): Generally Altered, Inflated, Truncated and Deflated Negative Binomial Distribution
gaitdnbinomial(): Generally Altered, Inflated, Truncated and Deflated Negative Binomial Regression
dgaitdpois() pgaitdpois() qgaitdpois() rgaitdpois(): Generally Altered, Inflated, Truncated and Deflated Poisson Distribution
gaitdpoisson(): Generally Altered, Inflated, Truncated and Deflated Poisson Regression
gaitdzeta(): Generally Altered, Inflated, Truncated and Deflated Zeta Regression
dgaitdzeta() pgaitdzeta() qgaitdzeta() rgaitdzeta(): Generally Altered, Inflated and Truncated and Deflated Zeta Distribution
gamma1(): 1-parameter Gamma Regression Family Function
gamma2(): 2-parameter Gamma Regression Family Function
gammaR(): 2-parameter Gamma Regression Family Function
gammaff.mm(): Multivariate Gamma Family Function: Mathai and Moschopoulos (1992)
gammahyperbola(): Gamma Hyperbola Bivariate Distribution
garma(): GARMA (Generalized Autoregressive Moving-Average) Models
genbetaII(): Generalized Beta Distribution of the Second Kind
dgenbetaII(): The Generalized Beta II Distribution
gengamma.stacy(): Generalized Gamma distribution family function
dgengamma.stacy() pgengamma.stacy() qgengamma.stacy() rgengamma.stacy(): Generalized Gamma Distribution
dgenpois0() pgenpois0() qgenpois0() rgenpois0(): Generalized Poisson Distribution (Original Parameterization)
dgenpois1() pgenpois1() qgenpois1() rgenpois1() dgenpois2() pgenpois2() qgenpois2() rgenpois2(): Generalized Poisson Distribution (GP-1 and GP-2 Parameterizations of the Mean)
genpoisson0(): Generalized Poisson Regression (Original Parameterization)
genpoisson1(): Generalized Poisson Regression (GP-1 Parameterization)
genpoisson2(): Generalized Poisson Regression (GP-2 Parameterization)
genrayleigh(): Generalized Rayleigh Distribution Family Function
dgenray() pgenray() qgenray() rgenray(): The Generalized Rayleigh Distribution
gensh(): Generalized Secant Hyperbolic Regression Family Function
dgensh() pgensh() qgensh() rgensh(): Generalized Secant Hyperbolic Distribution
geometric() truncgeometric(): Geometric (Truncated and Untruncated) Distributions
get.smart(): Retrieve One Component of “.smart.prediction”
get.smart.prediction(): Retrieves “.smart.prediction”
gev() gevff(): Generalized Extreme Value Regression Family Function
dgev() pgev() qgev() rgev(): The Generalized Extreme Value Distribution
gew: General Electric and Westinghouse Data
goffset(): GAITD Offset for the GTE Method
gompertz(): Gompertz Regression Family Function
dgompertz() pgompertz() qgompertz() rgompertz(): Gompertz Distribution
gpd(): Generalized Pareto Distribution Regression Family Function
dgpd() pgpd() qgpd() rgpd(): The Generalized Pareto Distribution
grain.us: Grain Prices Data in USA
grc() rcim(): Row-Column Interaction Models including Goodman's RC Association Model and Unconstrained Quadratic Ordination
gumbel() gumbelff(): Gumbel Regression Family Function
gumbelII(): Gumbel-II Regression Family Function
dgumbelII() pgumbelII() qgumbelII() rgumbelII(): The Gumbel-II Distribution
dgumbel() pgumbel() qgumbel() rgumbel(): The Gumbel Distribution
guplot() guplot.default() guplot.vlm(): Gumbel Plot
has.intercept() has.interceptvlm(): Has a Fitted VGLM Got an Intercept Term?
hatvalues() hatvaluesvlm() hatplot() hatplot.vlm() dfbetavlm(): Hat Values and Regression Deletion Diagnostics
hdeff() hdeff.vglm() hdeff.numeric() hdeff.matrix(): Hauck-Donner Effects: A Detection Test for Wald Tests
hdeffsev(): Hauck-Donner Effect: Severity Measures
hdeffsev0() hdeffsev2(): Hauck-Donner Effect: Severity Measures
hormone: Hormone Assay Data
hspider: Hunting Spider Data
huber1() huber2(): Huber's Least Favourable Distribution Family Function
dhuber() edhuber() rhuber() qhuber() phuber(): Huber's Least Favourable Distribution
hunua: Hunua Ranges Data
hurea(): Husler-Reiss Angular Surface Distribution Family Function
dhurea(): The Husler-Reiss Angular Surface Distribution
hyperg(): Hypergeometric Family Function
hypersecant() hypersecant01(): Hyperbolic Secant Regression Family Function
hzeta(): Haight's Zeta Family Function
dhzeta() phzeta() qhzeta() rhzeta(): Haight's Zeta Distribution
iam(): Index from Array to Matrix
identitylink() negidentitylink(): Identity Link Function
inv.binomial(): Inverse Binomial Distribution Family Function
inv.gaussianff(): Inverse Gaussian Distribution Family Function
inv.lomax(): Inverse Lomax Distribution Family Function
dinv.lomax() pinv.lomax() qinv.lomax() rinv.lomax(): The Inverse Lomax Distribution
inv.paralogistic(): Inverse Paralogistic Distribution Family Function
dinv.paralogistic() pinv.paralogistic() qinv.paralogistic() rinv.paralogistic(): The Inverse Paralogistic Distribution
is.buggy() is.buggy.vlm(): Does the Fitted Object Suffer from a Known Bug?
is.crossing.vglm(): Quantile Crossing Detection
is.parallel.matrix() is.parallel.vglm(): Parallelism Constraint Matrices
is.smart(): Test For a Smart Object
is.zero.matrix() is.zero.vglm(): Zero Constraint Matrices
kendall.tau(): Kendall's Tau Statistic
kumar(): Kumaraswamy Regression Family Function
dkumar() pkumar() qkumar() rkumar(): The Kumaraswamy Distribution
lakeO: Annual catches on Lake Otamangakau from October 1974 to October 1989
lambertW(): The Lambert W Function
laplace(): Laplace Regression Family Function
dlaplace() plaplace() qlaplace() rlaplace(): The Laplace Distribution
latvar() lv(): Latent Variables
leipnik(): Leipnik Regression Family Function
lerch(): Lerch Phi Function
leukemia: Acute Myelogenous Leukemia Survival Data
levy(): Levy Distribution Family Function
dlgamma() plgamma() qlgamma() rlgamma(): The Log-Gamma Distribution
lgamma1() lgamma3(): Log-gamma Distribution Family Function
dlind() plind() rlind(): The Lindley Distribution
lindley(): 1-parameter Lindley Distribution
linkfun() linkfunvlm(): Link Functions for VGLMs
lino(): Generalized Beta Distribution Family Function
dlino() plino() qlino() rlino(): The Generalized Beta Distribution (Libby and Novick, 1982)
lirat: Low-iron Rat Teratology Data
lms.bcg(): LMS Quantile Regression with a Box-Cox transformation to a Gamma Distribution
lms.bcn(): LMS Quantile Regression with a Box-Cox Transformation to Normality
lms.yjn() lms.yjn2(): LMS Quantile Regression with a Yeo-Johnson Transformation to Normality
log1mexp() log1pexp(): Logarithms with an Unit Offset and Exponential Term
logF(): Natural Exponential Family Generalized Hyperbolic Secant Distribution Family Function
dlogF(): log F Distribution
logLik(<vlm>): Extract Log-likelihood for VGLMs/VGAMs/etc.
dlog() plog() qlog() rlog(): Logarithmic Distribution
logclink(): Complementary-log Link Function
logff(): Logarithmic Distribution
logistic1() logistic(): Logistic Distribution Family Function
logitlink() extlogitlink(): Logit Link Function
logitoffsetlink(): Logit-with-an-Offset Link Function
loglinb2(): Loglinear Model for Two Binary Responses
loglinb3(): Loglinear Model for Three Binary Responses
loglinb4(): Loglinear Model for Four Binary Responses
loglink() negloglink() logneglink(): Log Link Function, and Variants
logloglink() loglogloglink(): Log-log and Log-log-log Link Functions
lognormal(): Lognormal Distribution
logofflink() log1plink(): Log Link Function with an Offset
lomax(): Lomax Distribution Family Function
dlomax() plomax() qlomax() rlomax(): The Lomax Distribution
lpossums: Leadbeater's Possums
lqnorm(): Minimizing the L-q norm Family Function
lrt.stat() lrt.stat.vlm(): Likelihood Ratio Test Statistics Evaluated at the Null Values
lrtest() lrtest_vglm(): Likelihood Ratio Test of Nested Models
lvplot(): Latent Variable Plot
lvplot.qrrvglm(): Latent Variable Plot for QO models
lvplot.rrvglm(): Latent Variable Plot for RR-VGLMs
machinists: Machinists Accidents
makeham(): Makeham Regression Family Function
dmakeham() pmakeham() qmakeham() rmakeham(): The Makeham Distribution
margeff(): Marginal Effects for Several Categorical Response Models
marital.nz: New Zealand Marital Data
maxwell(): Maxwell Regression Family Function
dmaxwell() pmaxwell() qmaxwell() rmaxwell(): The Maxwell Distribution
mccullagh89(): McCullagh (1989) Distribution Family Function
meangaitd(): Mean of the GAITD Combo Density
melbmaxtemp: Melbourne Daily Maximum Temperatures
meplot() meplot.default() meplot.vlm(): Mean Excess Plot
micmen(): Michaelis-Menten Model
mills.ratio() mills.ratio2(): Mills Ratio
mix2exp(): Mixture of Two Exponential Distributions
mix2normal(): Mixture of Two Univariate Normal Distributions
mix2poisson(): Mixture of Two Poisson Distributions
model.framevlm(): Construct the Model Frame of a VLM Object
model.matrixqrrvglm(): Construct the Model Matrix of a QRR-VGLM Object
model.matrixvlm(): Construct the Design Matrix of a VLM Object
moffset(): Matrix Offset
multilogitlink(): Multi-logit Link Function
multinomial(): Multinomial Logit Model
nakagami(): Nakagami Regression Family Function
dnaka() pnaka() qnaka() rnaka(): Nakagami Distribution
nbcanlink(): Negative Binomial Canonical Link Function
negbinomial() polya() polyaR(): Negative Binomial Distribution Family Function
negbinomial.size(): Negative Binomial Distribution Family Function With Known Size
niters() niters.vlm(): Number of Iterations
normal.vcm(): Univariate Normal Distribution as a Varying-Coefficient Model
nparam() nparam.vlm() nparam.vgam() nparam.rrvglm() nparam.drrvglm() nparam.qrrvglm() nparam.rrvgam(): Number of Parameters
olym08 olym12: 2008 and 2012 Summer Olympic Final Medal Count Data
ordpoisson(): Ordinal Poisson Family Function
ordsup() ordsup.vglm(): Ordinal Superiority Measures
oxtemp: Oxford Temperature Data
paralogistic(): Paralogistic Distribution Family Function
dparalogistic() pparalogistic() qparalogistic() rparalogistic(): The Paralogistic Distribution
paretoIV() paretoIII() paretoII(): Pareto(IV/III/II) Distribution Family Functions
dparetoIV() pparetoIV() qparetoIV() rparetoIV() dparetoIII() pparetoIII() qparetoIII() rparetoIII() dparetoII() pparetoII() qparetoII() rparetoII() dparetoI() pparetoI() qparetoI() rparetoI(): The Pareto(IV/III/II) Distributions
paretoff() truncpareto(): Pareto and Truncated Pareto Distribution Family Functions
perks(): Perks Distribution Family Function
dperks() pperks() qperks() rperks(): The Perks Distribution
perspqrrvglm(): Perspective plot for QRR-VGLMs
pgamma.deriv(): Derivatives of the Incomplete Gamma Integral
pgamma.deriv.unscaled(): Derivatives of the Incomplete Gamma Integral (Unscaled Version)
plotdeplot.lmscreg(): Density Plot for LMS Quantile Regression
plotdgaitd() plotdgaitd.vglm(): Plotting the GAITD Combo Density from a GAITD Regression Object
plotqrrvglm(): Model Diagnostic Plots for QRR-VGLMs
plotqtplot.lmscreg(): Quantile Plot for LMS Quantile Regression
plotrcim0(): Main Effects Plot for a Row-Column Interaction Model (RCIM)
plotvgam(): Default VGAM Plotting
plotvgam.control(): Control Function for plotvgam()
plotvglm(): Plots for VGLMs
pneumo: Pneumoconiosis in Coalminers Data
poisson.points(): Poisson-points-on-a-plane/volume Distances Distribution
dpois.points(): Poisson Points Distribution
poissonff(): Poisson Regression
dpolono() ppolono() rpolono(): The Poisson Lognormal Distribution
rposbern() dposbern(): Positive Bernoulli Sequence Model
posbernoulli.b(): Positive Bernoulli Family Function with Behavioural Effects
posbernoulli.t(): Positive Bernoulli Family Function with Time Effects
posbernoulli.tb(): Positive Bernoulli Family Function with Time and Behavioural Effects
posbinomial(): Positive Binomial Distribution Family Function
dposgeom() pposgeom() qposgeom() rposgeom(): Positive-Geometric Distribution
posnegbinomial(): Positive Negative Binomial Distribution Family Function
dposnorm() pposnorm() qposnorm() rposnorm(): The Positive-Normal Distribution
posnormal(): Positive Normal Distribution Family Function
pospoisson(): Positive Poisson Distribution Family Function
powerlink(): Power Link Function
prats: Pregnant Rats Toxological Experiment Data
predictqrrvglm(): Predict Method for a CQO fit
predictvglm(): Predict Method for a VGLM fit
prentice74(): Prentice (1974) Log-gamma Distribution
prinia: Yellow-bellied Prinia
probitlink(): Probit Link Function
profilevglm(): Method for Profiling vglm Objects
propodds(): Proportional Odds Model for Ordinal Regression
prplot() prplot.control(): Probability Plots for Categorical Data Analysis
put.smart(): Adds a List to the End of the List “.smart.prediction”
qrrvglm.control(): Control Function for QRR-VGLMs (CQO)
qtplot.gumbel(): Quantile Plot for Gumbel Regression
qtplot.lmscreg(): Quantile Plot for LMS Quantile Regression
qvar(): Quasi-variances Extraction Function
rayleigh() cens.rayleigh(): Rayleigh Regression Family Function
drayleigh() prayleigh() qrayleigh() rrayleigh(): Rayleigh Distribution
rcqo(): Constrained Quadratic Ordination
rdiric(): The Dirichlet distribution
rec.exp1(): Upper Record Values from a 1-parameter Exponential Distribution
rec.normal(): Upper Record Values from a Univariate Normal Distribution
reciprocallink() negreciprocallink(): Reciprocal Link Function
residualsvglm(): Residuals for a VGLM fit
rhobitlink(): Rhobit Link Function
drice() price() qrice() rrice(): The Rice Distribution
riceff(): Rice Distribution Family Function
rigff(): Reciprocal Inverse Gaussian distribution
rlplot.gevff(): Return Level Plot for GEV Fits
rootogram4() rootogram4vglm(): Rootograms (S4 generic) for Assessing Goodness of Fit of Probability Models
round2(): Rounding of Numbers to Base 2
rrar(): Nested Reduced-rank Autoregressive Models for Multiple Time Series
rrvglm-class: Class “rrvglm”
rrvglm(): Fitting Reduced-Rank Vector Generalized Linear Models (RR-VGLMs) and Doubly Constrained RR-VGLMs (DRR-VGLMs)
rrvglm.control(): Control Function for rrvglm()
rrvglm.optim.control(): Control Function for rrvglm() Calling optim()
ruge: Rutherford-Geiger Polonium Data
s(): Defining Smooths in VGAM Formulas
sc.studentt2(): Scaled Student t Distribution with 2 df Family Function
dsc.t2() psc.t2() qsc.t2() rsc.t2(): Expectiles/Quantiles of the Scaled Student t Distribution with 2 Df
score.stat() score.stat.vlm(): Rao's Score Test Statistics Evaluated at the Null Values
seglines(): Hauck-Donner Effects: Segmented Lines Plot
seq2binomial(): The Two-stage Sequential Binomial Distribution Family Function
setup.smart(): Smart Prediction Setup
simplex(): Simplex Distribution Family Function
dsimplex() rsimplex(): Simplex Distribution
simulate(<vlm>): Simulate Responses for VGLMs and VGAMs
sinmad(): Singh-Maddala Distribution Family Function
dsinmad() psinmad() qsinmad() rsinmad(): The Singh-Maddala Distribution
skellam(): Skellam Distribution Family Function
dskellam() rskellam(): The Skellam Distribution
dskewnorm() rskewnorm(): Skew-Normal Distribution
skewnormal(): Univariate Skew-Normal Distribution Family Function
slash(): Slash Distribution Family Function
dslash() pslash() rslash(): Slash Distribution
sloglink() lcsloglink(): Square root–Log Link Mixtures
sm.os(): Defining O'Sullivan Spline Smooths in VGAM Formulas
sm.ps(): Defining Penalized Spline Smooths in VGAM Formulas
smart.expression: S Expression for Smart Functions
smart.mode.is(): Determine What Mode the Smart Prediction is In
sm.bs() sm.ns() sm.poly() sm.scale(): Smart Prediction
specials() specialsvglm(): Special Values or Quantities in a Fitted Object
spikeplot(): Spike Plot
sratio(): Ordinal Regression with Stopping Ratios
step4() step4vglm(): Choose a model by AIC in a Stepwise Algorithm
studentt() studentt2() studentt3(): Student t Distribution
summary(<drrvglm>) show(<summary.drrvglm>) summary(<rrvglm>) show(<summary.rrvglm>): Summarizing Reduced Rank Vector Generalized Linear Model (RR-VGLM) and Doubly constrained RR-VGLM Fits
summarypvgam() show(<summary.pvgam>): Summarizing Penalized Vector Generalized Additive Model Fits
summaryvgam() show(<summary.vgam>): Summarizing Vector Generalized Additive Model Fits
summaryvglm() show(<summary.vglm>): Summarizing Vector Generalized Linear Model Fits
tobit(): Tobit Regression
dtobit() ptobit() qtobit() rtobit(): The Tobit Distribution
topple(): Topp-Leone Distribution Family Function
dtopple() ptopple() qtopple() rtopple(): The Topp-Leone Distribution
toxop: Toxoplasmosis Data
dtriangle() ptriangle() qtriangle() rtriangle(): The Triangle Distribution
trim.constraints(): Trimmed Constraint Matrices
trinormal(): Trivariate Normal Distribution Family Function
dtrinorm() rtrinorm(): Trivariate Normal Distribution Density and Random Variates
trplot(): Trajectory Plot
trplot.qrrvglm(): Trajectory plot for QRR-VGLMs
dtruncpareto() ptruncpareto() qtruncpareto() rtruncpareto(): The Truncated Pareto Distribution
truncweibull(): Truncated Weibull Distribution Family Function
ucberk: University California Berkeley Graduate Admissions
uninormal(): Univariate Normal Distribution
vcovvlm() vcovrrvglm() vcovdrrvglm() vcovqrrvglm(): Calculate Variance-Covariance Matrix for a Fitted VLM or RR-VGLM or DRR-VGLM or QRR-VGLM Object
venice venice90: Venice Maximum Sea Levels Data
vgam-class: Class “vgam”
vgam(): Fitting Vector Generalized Additive Models
vgam.control(): Control Function for vgam()
vglm-class: Class “vglm”
vglm(): Fitting Vector Generalized Linear Models
vglm.control(): Control Function for vglm()
vglmff-class: Class “vglmff”
vonmises(): von Mises Distribution Family Function
vplot.profile() vpairs.profile(): Plotting Functions for 'profile' Objects
vsmooth.spline(): Vector Cubic Smoothing Spline
waitakere: Waitakere Ranges Data
wald.stat() wald.stat.vlm(): Wald Test Statistics Evaluated at the Null Values
waldff(): Wald Distribution Family Function
weibull.mean(): Weibull Distribution Family Function, Parameterized by the Mean
weibullR(): Weibull Distribution Family Function
weightsvglm(): Prior and Working Weights of a VGLM fit
wine: Bitterness in Wine Data
wrapup.smart(): Cleans Up After Smart Prediction
wsdm(): The WSDM Function
wsdm3(): The WSDM Function for GLMs
yeo.johnson(): Yeo-Johnson Transformation
yulesimon(): Yule-Simon Family Function
dyules() pyules() qyules() ryules(): Yule-Simon Distribution
dzabinom() pzabinom() qzabinom() rzabinom(): Zero-Altered Binomial Distribution
zabinomial() zabinomialff(): Zero-Altered Binomial Distribution
dzageom() pzageom() qzageom() rzageom(): Zero-Altered Geometric Distribution
zageometric() zageometricff(): Zero-Altered Geometric Distribution
dzanegbin() pzanegbin() qzanegbin() rzanegbin(): Zero-Altered Negative Binomial Distribution
zanegbinomial() zanegbinomialff(): Zero-Altered Negative Binomial Distribution
dzapois() pzapois() qzapois() rzapois(): Zero-Altered Poisson Distribution
zapoisson() zapoissonff(): Zero-Altered Poisson Distribution
zero: The zero Argument in VGAM Family Functions
zeta(): Riemann's (and the Hurwitz) Zeta Function, With Derivatives
dzeta() pzeta() qzeta() rzeta(): The Zeta Distribution
zetaff(): Zeta Distribution Family Function
dzibinom() pzibinom() qzibinom() rzibinom(): Zero-Inflated Binomial Distribution
zibinomial() zibinomialff(): Zero-Inflated Binomial Distribution Family Function
dzigeom() pzigeom() qzigeom() rzigeom(): Zero-Inflated Geometric Distribution
zigeometric() zigeometricff(): Zero-Inflated Geometric Distribution Family Function
dzinegbin() pzinegbin() qzinegbin() rzinegbin(): Zero-Inflated Negative Binomial Distribution
zinegbinomial() zinegbinomialff(): Zero-Inflated Negative Binomial Distribution Family Function
zipebcom(): Exchangeable Bivariate cloglog Odds-ratio Model From a Zero-inflated Poisson Distribution
zipf(): Zipf Distribution Family Function
dzipf() pzipf() qzipf() rzipf(): The Zipf Distribution
dzipfmb() pzipfmb() qzipfmb() rzipfmb(): The Zipf-Mandelbrot Distribution
dzipois() pzipois() qzipois() rzipois(): Zero-Inflated Poisson Distribution
zipoisson() zipoissonff(): Zero-Inflated Poisson Distribution Family Function
zoabetaR(): Zero- and One-Inflated Beta Distribution Family Function
dzoabeta() pzoabeta() qzoabeta() rzoabeta(): The Zero/One-Inflated Beta Distribution