Read one table from a 'GraphPad Prism' '.pzfx' file
Arguments
- path
Path to the '.pzfx' file.
- table
Table to read. Either a string (the name of a table), or an integer (the position of the table). If neither argument specifies the table, defaults to the first table.
- strike_action
One of c("exclude", "keep", "star") or c("e", "k", "s"). Should stricken values in the original .pzfx be excluded, kept or labeled with a trailing "*". If a trailing "*" is added, the column will be of type character.
- date_x
One of c("numeric", "character", "both") or c("n", "c", "b"). Should x column of format "Date" be handled as numeric (time elapsed from the first time point), character (the date string encoded by Prism, for example "8-Sep-2008"), or both (leading to two columns).
Examples
pzfx_file <- system.file("extdata/exponential_decay.pzfx", package = "pzfx", mustWork = TRUE)
read_pzfx(pzfx_file, table = 1, strike_action="exclude", date_x="character")
#> Minutes Control_1 Control_2 Control_3 Treated_1 Treated_2 Treated_3
#> 1 1 8887 7366 9612 6532 7905 7907
#> 2 2 8329 NA 8850 5352 5841 6277
#> 3 3 7907 8810 8669 5177 4082 3157
#> 4 4 7413 8481 6489 3608 NA 4226
#> 5 5 7081 7178 5716 2559 3697 2816
#> 6 6 6249 6492 NA 1671 3053 2891
#> 7 8 5442 6172 6409 2264 1658 1879
#> 8 10 4020 3758 4138 1905 1302 1406
#> 9 14 4559 3146 2547 2994 1338 739
#> 10 20 3033 1587 2754 1444 NA 760
#> 11 25 2105 1707 2152 281 484 765
#> 12 30 1005 2156 1185 1103 1517 833
#> 13 50 820 1513 1591 1918 1128 1293